BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F09LP1|AL428092
(968 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1807 0.0
3x_Contig943 436 e-122
3x_Contig1755 177 5e-44
3x_Contig1465 129 1e-29
>3x_Contig1682
Length = 16889
Score = 1807 bits (911), Expect = 0.0
Identities = 946/951 (99%), Gaps = 5/951 (0%)
Strand = Plus / Plus
Query: 1 tattatactcctaatttcctaaaccatctatcttccattatatctctattctgttctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tattatactcctaatttcctaaaccatctatcttccattatatctctattctgttctgaa 383
Query: 61 tatcttttataaagttttaaaaacttaagaagacttcaattaattttacaggaaacccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatcttttataaagttttaaaaacttaagaagacttcaattaattttacaggaaacccca 443
Query: 121 cattatcaaataacatacaaacgaaattataatgtctaaggctgttggtattgatttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cattatcaaataacatacaaacgaaattataatgtctaaggctgttggtattgatttggg 503
Query: 181 taccacttactcatgtgttgctcacttttctaacgaccgtgtcgaaattttggctaacga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taccacttactcatgtgttgctcacttttctaacgaccgtgtcgaaattttggctaacga 563
Query: 241 ccaaggtaacagaactaccccatcttttgtcgctttcaccgacactgaaagattgattgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccaaggtaacagaactaccccatcttttgtcgctttcaccgacactgaaagattgattgg 623
Query: 301 tgatgctgccaagaaccaagctgctatgaacccagccaacactgttttcgatgctaagcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgatgctgccaagaaccaagctgctatgaacccagccaacactgttttcgatgctaagcg 683
Query: 361 tttgattggtagaaacttcagtgacgcagaagttcaaggtgatatcaagcacttcccatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttgattggtagaaacttcagtgacgcagaagttcaaggtgatatcaagcacttcccatt 743
Query: 421 caaggtcattgacgttgctggtaagccacaagtcgaagtcgaatacaagggtgaaaacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 caaggtcattgacgttgctggtaagccacaagtcgaagtcgaatacaagggtgaaaacaa 803
Query: 481 ggttttcaccccagaagaaatctcctctatgattttgagtaagatgaaggaaactgctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ggttttcaccccagaagaaatctcctctatgattttgagtaagatgaaggaaactgctga 863
Query: 541 atcttacttgggttgcaaggttaacgacgctgtcgttaccgttccagcttactttaacga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 atcttacttgggttgcaaggttaacgacgctgtcgttaccgttccagcttactttaacga 923
Query: 601 ttctcaaagacaagctaccaaggatgctggtaccattgctggtttgaacgttctaagaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ttctcaaagacaagctaccaaggatgctggtaccattgctggtttgaacgttctaagaat 983
Query: 661 cattaacgaacctaccgctgctgccattgcttacggtttggacaagaaagatgaaggcga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 cattaacgaacctaccgctgctgccattgcttacggtttggacaagaaagatgaaggcga 1043
Query: 721 aaagaacgtcttgatcttcgatttgggtggtggtaccttcgatgtctccttgttgaccat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 aaagaacgtcttgatcttcgatttgggtggtggtaccttcgatgtctccttgttgaccat 1103
Query: 781 tgaagacggtatcttcgaagttaaggctaccgctgggtgacactcacttggggtggtgaa 840
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1104 tgaagacggtatcttcgaagttaaggctaccgct-ggtgacactcactt-gggtggtgaa 1161
Query: 841 gatttcgataacagattagttaatcacttcgttcaagaattcaagagaaagaacaaaaag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 gatttcgataacagattagttaatcacttcgttcaagaattcaagagaaagaacaaaaag 1221
Query: 901 gacttga-cactaaccaaagagctttgagaaga-tgag-actgcttgtgaa 948
||||||| ||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 1222 gacttgaccactaaccaaagagctttgagaagattgagaactgcttgtgaa 1272
>3x_Contig943
Length = 2708
Score = 436 bits (220), Expect = e-122
Identities = 418/480 (87%), Gaps = 3/480 (0%)
Strand = Plus / Plus
Query: 455 gaagtcgaatacaagggtgaaaacaaggttttcaccccagaagaaatctcctctatgatt 514
||||| |||||||||||||||| || || |||| ||||||||||| || |||||| |
Sbjct: 452 gaagttgaatacaagggtgaaactaaagtgttcagtccagaagaaatttcttctatggtc 511
Query: 515 ttgagtaagatgaaggaaactgctgaatcttacttgggttgcaaggttaacgacgctgtc 574
|| ||||||||||||||||| |||||| ||||||| ||| ||| ||||| ||||||||
Sbjct: 512 ttaagtaagatgaaggaaaccgctgaagcttacttaggtaccaaagttaatgacgctgtt 571
Query: 575 gttaccgttccagcttactttaacgattctcaaagacaagctaccaaggatgctggtacc 634
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gttaccgttccagcttatttcaacgattctcaaagacaagctaccaaggatgctggtacc 631
Query: 635 attgctggtttgaacgttctaagaatcattaacgaacctaccgctgctgccattgcttac 694
||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| |||
Sbjct: 632 attgctggtttgaacgtcttgagaattattaacgaacctactgctgctgccattgcgtac 691
Query: 695 ggtttggacaagaaagatgaaggcgaaaagaacgtcttgatcttcgatttgggtggtggt 754
||| | || ||||| | |||| | ||||||||||||||||||||||||||||||
Sbjct: 692 ggtctagataagaagggaacttccgaacataacgtcttgatcttcgatttgggtggtggt 751
Query: 755 accttcgatgtctccttgttgaccattgaagacggtatcttcgaagttaaggctaccgct 814
|| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 752 actttcgatgtctccttgttgactattgaagacggtatcttcgaagttaaggccaccgc- 810
Query: 815 gggtgacactcacttggggtggtgaagatttcgataacagattagttaatcacttcgttc 874
||||| |||||||| |||||||||||||| ||||||||||| |||||||| || |
Sbjct: 811 aggtgatactcactt-aggtggtgaagattttgataacagattggttaatcatttggcca 869
Query: 875 aagaattcaagagaaagaacaaaaaggacttga-cactaaccaaagagctttgagaagat 933
| |||||||||||||||||||| ||||| |||| || |||||||||| ||||||||||||
Sbjct: 870 atgaattcaagagaaagaacaagaaggatttgaccaataaccaaagatctttgagaagat 929
Score = 181 bits (91), Expect = 3e-45
Identities = 187/219 (85%)
Strand = Plus / Plus
Query: 152 atgtctaaggctgttggtattgatttgggtaccacttactcatgtgttgctcacttttct 211
||||| || ||||||||||||||||| ||||| ||||| || |||||||| || || |
Sbjct: 149 atgtcaaaagctgttggtattgatttaggtactacttattcgtgtgttgcacatttcacc 208
Query: 212 aacgaccgtgtcgaaattttggctaacgaccaaggtaacagaactaccccatcttttgtc 271
||||| ||||| |||||| | || ||||| |||||||| ||||| || ||||||| ||
Sbjct: 209 aacgatcgtgtggaaattattgccaacgatcaaggtaatagaacaactccatcttacgtt 268
Query: 272 gctttcaccgacactgaaagattgattggtgatgctgccaagaaccaagctgctatgaac 331
|| || ||||| || |||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 269 gcctttaccgatacagaaagattgattggtgatgcagcaaagaaccaagctgctatcaac 328
Query: 332 ccagccaacactgttttcgatgctaagcgtttgattggt 370
||| | |||||||||||||||||||||||||||||||||
Sbjct: 329 ccatcaaacactgttttcgatgctaagcgtttgattggt 367
>3x_Contig1755
Length = 22936
Score = 177 bits (89), Expect = 5e-44
Identities = 119/129 (92%)
Strand = Plus / Minus
Query: 569 gctgtcgttaccgttccagcttactttaacgattctcaaagacaagctaccaaggatgct 628
|||||||||||||| ||||||||||| |||||| ||||||||||||| ||||||||||||
Sbjct: 16597 gctgtcgttaccgtcccagcttacttcaacgatgctcaaagacaagccaccaaggatgct 16538
Query: 629 ggtaccattgctggtttgaacgttctaagaatcattaacgaacctaccgctgctgccatt 688
||| ||||||||||||||||||| | ||||||||||||||||| || ||||||||||||
Sbjct: 16537 ggtgccattgctggtttgaacgtcttgagaatcattaacgaaccaactgctgctgccatt 16478
Query: 689 gcttacggt 697
|||||||||
Sbjct: 16477 gcttacggt 16469
Score = 103 bits (52), Expect = 6e-22
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 287 gaaagattgattggtgatgctgccaagaaccaagctgctatgaacccagccaacactgtt 346
||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 16879 gaaagattgatcggtgatgctgctaagaaccaagctgctttgaacccaaaaaacaccgtc 16820
Query: 347 ttcgatgctaagcgtttgattggtagaa 374
||||||||||||||||| ||||||||||
Sbjct: 16819 ttcgatgctaagcgtttaattggtagaa 16792
>3x_Contig1465
Length = 9847
Score = 129 bits (65), Expect = 1e-29
Identities = 101/113 (89%)
Strand = Plus / Plus
Query: 587 gcttactttaacgattctcaaagacaagctaccaaggatgctggtaccattgctggtttg 646
||||||||||||||| ||||||||||||| || ||||| || ||| ||||||||||||||
Sbjct: 3795 gcttactttaacgatgctcaaagacaagccactaaggacgcaggtgccattgctggtttg 3854
Query: 647 aacgttctaagaatcattaacgaacctaccgctgctgccattgcttacggttt 699
||| || | |||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 3855 aacattttgagaatcgttaacgaacctaccgctgcagccattgcttatggttt 3907
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7651
Number of Sequences: 1807
Number of extensions: 7651
Number of successful extensions: 106
Number of sequences better than 1.0e-20: 4
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)